Work out which gene each cluster belongs to. Note the chromosome names used in the two inputs must match.

Source: R/utils.R

Work out which gene each cluster belongs to. Note the chromosome names used in the two inputs must match.

map_clusters_to_genes(intron_meta, exons_table)

Arguments

intron_meta

Data frame describing the introns, usually from get_intron_meta
exons_table

Table of exons, see e.g. /data/gencode19_exons.txt.gz

Value

Data.frame with cluster ids and genes separated by commas